Browsing by Author "Odongo, Steven"

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    Animal African Trypanosomosis in Sub-Saharan Africa and Beyond African Borders
    (Springer Vienna, 2013) Namangala, Boniface; Odongo, Steven
    This chapter mainly focuses attention on trypanosome infections occurring in domestic animal species, with particular emphasis on those in the African continent. Specific trypanosome species cause three major disease syndromes within Africa namely nagana, surra and Dourine. Nagana, mainly affecting domestic ruminants, pigs and pets in sub-Saharan Africa, is caused by Trypanosoma congolense, Trypanosoma vivax, Trypanosoma brucei subspecies as well as Trypanosoma simiae, primarily transmitted by tsetse flies (Glossina species). Surra, caused by Trypanosoma evansi, mainly affects camels, horses, ruminants, pigs and dogs in North and East Africa. Beyond the African borders, surra occurs in the Middle East, Asia and Latin America. Unlike other trypanosome syndromes, Dourine is non-vector borne, but rather transmitted through coitus from stallions to mares and vice versa. It occurs worldwide wherever horses are reared in large numbers. Thus non-vector-borne trypanosomes have a wider geographical distribution beyond the African continent as they may also be spread through international trade. Although some trypanosome species strictly cause disease to animals, others such as T. b. rhodesiense and T. b. gambiense cause disease to both animals and humans. In aggregate, trypanosome infections have serious socio-economic implications and significantly contribute to poverty and underdevelopment experienced in the affected regions where livestock production is the main livelihood of the local communities. As such, efforts towards effective control of the disease are justified.
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    An Anti-proteome Nanobody Library Approach Yields a Specific Immunoassay for Trypanosoma congolense Diagnosis Targeting Glycosomal Aldolase
    (PLoS neglected tropical diseases, 2016) Odongo, Steven; Sterckx, Yann G. J.; Stijlemans, Benoît; Pillay, Davita; Muyldermans, Serge; Magez, Stefan
    Infectious diseases pose a severe worldwide threat to human and livestock health. While early diagnosis could enable prompt preventive interventions, the majority of diseases are found in rural settings where basic laboratory facilities are scarce. Under such field conditions, point-of-care immunoassays provide an appropriate solution for rapid and reliable diagnosis. The limiting steps in the development of the assay are the identification of a suitable target antigen and the selection of appropriate high affinity capture and detection antibodies. To meet these challenges, we describe the development of a Nanobody (Nb)-based antigen detection assay generated from a Nb library directed against the soluble proteome of an infectious agent. In this study, Trypanosoma congolense was chosen as a model system.
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    Genetic diversity of aflatoxin-producing Aspergillus flavus isolated from groundnuts in selected agroecological zones of Uganda
    (BMC microbiology, 2020) Acur, Amos; Arias, Renée S.; Odongo, Steven; Tuhaise, Samuel; Ssekandi, Joseph; Muhanguzi, Dennis; Adriko, John; Buah, Stephen; Kiggundu, Andrew
    Background Aspergillus is the main fungal genus causing pre- and post-harvest contamination of groundnuts. Aspergillus flavus belongs to section Flavi, a group consisting of both the aflatoxigenic species (A. flavus, A. parasiticus and A. nomius) and non-aflatoxigenic species (A. oryzae, A. sojae and A. tamarii). Aflatoxins are food-borne toxic secondary metabolites produced by Aspergillus species, causing hepatic carcinoma and stunting in children and are the most toxic carcinogenic mycotoxins ever identified. Despite the well-known public health problems associated with aflatoxicosis in Uganda, information about the genetic diversity of the main aflatoxin causing fungus, Aspergillus flavus in this country is still limited. Results A cross-sectional survey was therefore carried out in three main groundnut-growing agro-ecological zones (AEZs) of Uganda; West Nile farming system, Lake Kyoga basin mixed farming system and Lake Victoria basin farming system. This was to assess the genetic diversity of A. flavus and to establish the contamination rates of groundnuts with Aspergillus species at pre- and post-harvest stages. Out of the 213 A. flavus isolates identified in this study, 96 representative isolates were fingerprinted using 16 insertion/deletion microsatellite markers. Data from fingerprinting were analyzed through Neighbor Joining while polymorphism was determined using Arlequin v 3.5. The pre- and post-harvest contamination rates were; 2.5% and 50.0% (West Nile farming system), 55.0% and 35.0% (Lake Kyoga basin mixed farming system) and 32.5% and 32.5% (Lake Victoria basin farming system) respectively. The Chi-square test showed no significant differences between pre- and post-harvest contamination rates among AEZs (p = 0.199). Only 67 out of 96 isolates produced suitable allele scores for genotypic analysis. Analysis of genetic diversity showed higher variation within populations than among populations. Two major clusters (aflatoxigenic and non-aflatoxigenic isolates) were identified as colonizing groundnuts at pre- and postharvest stages. Conclusions These findings provide a first insight on the existence of non-aflatoxigenic strains of A. flavus in Uganda. These strains are potential candidates for developing local Aspergillus biocontrol agent.
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    MIF-MediatedHemodilution Promotes Pathogenic Anemia in Experimental African Trypanosomosis
    (PLoS Pathogens, 2016) Stijlemans, Benoît; Korf, Hannelie; Sparkes, Amanda; Mazzone, Massimiliano; Odongo, Steven; Bucala, Richard; Baetselier, Patrick De
    Animal African trypanosomosis is a major threat to the economic development and human health in sub-Saharan Africa. Trypanosoma congolense infections represent the major constraint in livestock production, with anemia as the major pathogenic lethal feature. The mechanisms underlying anemia development are ill defined, which hampers the development of an effective therapy. Here, the contribution of the erythropoietic and erythrophagocytic potential as well as of hemodilution to the development of T. congolense-induced anemia were addressed in a mouse model of low virulence relevant for bovine trypanosomosis. We show that in infected mice, splenic extramedullary erythropoiesis could compensate for the chronic low-grade type I inflammation-induced phagocytosis of senescent red blood cells (RBCs) in spleen and liver myeloid cells, as well as for the impaired maturation of RBCs occurring in the bone marrow and spleen. Rather, anemia resulted from hemodilution. Our data also suggest that the heme catabolism subsequent to sustained erythrophagocytosis resulted in iron accumulation in tissue and hyperbilirubinemia. Moreover, hypoalbuminemia, potentially resulting from hemodilution and liver injury in infected mice, impaired the elimination of toxic circulating molecules like bilirubin. Hemodilutional thrombocytopenia also coincided with impaired coagulation. Combined, these effects could elicit multiple organ failure and uncontrolled bleeding thus reduce the survival of infected mice. MIF (macrophage migrating inhibitory factor), a potential pathogenic molecule in African trypanosomosis, was found herein to promote erythrophagocytosis, to block extramedullary erythropoiesis and RBC maturation, and to trigger hemodilution. Hence, these data prompt considering MIF as a potential target for treatment of natural bovine trypanosomosis.
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    Nanobodies: A Review of Generation, Diagnostics and Therapeutics
    (International Journal of Molecular Sciences, 2023) Jin, Bo-kyung; Odongo, Steven; Radwanska, Magdalena; Magez, Stefan
    Nanobodies, also referred to as single domain-based VHHs, are antibody fragments derived from heavy-chain only IgG antibodies found in the Camelidae family. Due to their small size, simple structure, high antigen binding affinity, and remarkable stability in extreme conditions, nanobodies possess the potential to overcome several of the limitations of conventional monoclonal antibodies. For many years, nanobodies have been of great interest in a wide variety of research fields, particularly in the diagnosis and treatment of diseases. This culminated in the approval of the world’s first nanobody based drug (Caplacizumab) in 2018 with others following soon thereafter. This review will provide an overview, with examples, of (i) the structure and advantages of nanobodies compared to conventional monoclonal antibodies, (ii) methods used to generate and produce antigen-specific nanobodies, (iii) applications for diagnostics, and (iv) ongoing clinical trials for nanobody therapeutics as well as promising candidates for clinical development.
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    Paradigm shift in the diagnosis of peste des petits ruminants: scoping review
    (Acta Veterinaria Scandinavica, 2020) Kinimi, Edson; Odongo, Steven; Muyldermans, Serge; Kock, Richard; Misinzo, Gerald
    Peste des petits ruminants virus causes a highly contagious disease, which poses enormous economic losses in domestic animals and threatens the conservation of wild herbivores. Diagnosis remains a cornerstone to the Peste des petits ruminants Global Control and Eradication Strategy, an initiative of the World Organisation for Animal Health and the Food and Agriculture Organisation. The present review presents the peste des petits ruminants diagnostic landscape, including the practicality of commercially available diagnostic tools, prototype tests and opportunities for new technologies. The most common peste des petits ruminants diagnostic tools include; agar gel immunodiffusion, counter-immunoelectrophoresis, enzyme-linked immunosorbent assays, reverse transcription polymerase chain reaction either gel-based or real-time, reverse transcription loop-mediated isothermal amplification, reverse transcription recombinase polymerase amplification assays, immunochromatographic lateral flow devices, luciferase immunoprecipitation system and pseudotype-based assays. These tests vary in their technical demands, but all require a laboratory with exception of immunochromatographic lateral flow and possibly reverse transcription loop-mediated isothermal amplification and reverse transcription recombinase polymerase amplification assays. Thus, we are proposing an efficient integration of diagnostic tests for rapid and correct identification of peste des petits ruminants in endemic zones and to rapidly confirm outbreaks. Deployment of pen-side tests will improve diagnostic capacity in extremely remote settings and susceptible wildlife ecosystems, where transportation of clinical samples in the optimum cold chain is unreliable.
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    Prevalence of Crimean-Congo haemorrhagic fever in livestock following a confrmed human case in Lyantonde district, Uganda
    (Parasites & Vectors, 2023) Atim, Stella A.; Niebel, Marc; Vudriko, Patrick; Odongo, Steven; Balinandi, Stephen; Aber, Peace; Bameka, Ronald; Ademun, Anna R.; Masembe, Charles; Tweyongyere, Robert; Thomson, Emma C.
    Crimean-Congo haemorrhagic fever (CCHF) is a tick-borne viral infection, characterized by haemorrhagic fever in humans and transient asymptomatic infection in animals. It is an emerging human health threat causing sporadic outbreaks in Uganda. We conducted a detailed outbreak investigation in the animal population following the death from CCHF of a 42-year-old male cattle trader in Lyantonde district, Uganda. This was to ascertain the extent of CCHF virus (CCHFV) circulation among cattle and goats and to identify affected farms and ongoing increased environmental risk for future human infections.
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    Prevalence of Fascioliasis and Associated Economic Losses in Cattle Slaughtered at Lira Municipality Abattoir in Northern Uganda
    (Animals, 2021) Opio, Lawrence George; Abdelfattah, Essam M.; Terry, Joshua; Odongo, Steven; Okello, Emmanuel
    Fascioliasis (liver fluke infestation) is one of the most important parasitic diseases affecting cattle, other ruminant animals and humans. Fascioliasis causes large, but usually neglected, economic losses to cattle farmers and traders. The objectives of this study were to assess the prevalence and associated risks for fascioliasis in slaughter cattle and estimate the financial losses due to liver condemnation at the Lira Municipal abattoir in Uganda. A total of 216 cattle were sampled during the study period. Animal breed and sex were determined by observing the phenotypic characteristics of the animals. Age was determined by assessing the eruption and wearing of permanent teeth. After slaughter, the liver was examined for presence of Fasciola spp. (liver flukes) by visual inspection, palpation, and incisions. The bile ducts and gall bladder were similarly examined for presence of mature Fasciola spp. The gross weight and amount of liver trimmed-off due to fluke infestation were determined. Of the 216 liver examined, 65.7% (n = 142) were infested with Fasciola spp. Cattle that were aged 4–5 years old at the time of slaughter had significantly greater odds (OR = 5.84; CI [2.79–12.22]) of being infested with Fasciola spp. compared to those that were younger than 3.5 years old. In contrast, cattle that had a body condition score of 3.5 or 4 had lower odds (OR= 0.42; CI [0.21–0.88] and OR = 0.22; CI [0.04–1.10]) of fascioliasis than those with a BCS of 3. Other tested variables including animal origin, breed, sex, and gross weight of the liver had no significant effect on the prevalence of fascioliasis. This study also revealed that the abattoir loses an estimated 38 million UGX annually due to condemnation of Fasciola-infested liver (one UGX= 0.00027 USD; July 2016). Our study showed that the prevalence of fascioliasis was high in Lira District, Uganda, which results in a large amount of liver being condemned and destroyed, leading to financial losses for affected farmers in the area. Therefore, there is a need to take the necessary preventive measures to control the disease and increase awareness among farmers and medical personnel in the area due to the zoonotic nature of fascioliasis.
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    Retrospective in silico mutation profiling of SARS-CoV-2 structural proteins circulating in Uganda by July 2021: Towards refinement of COVID-19 disease vaccines, diagnostics, and therapeutics
    (Plos one, 2022) Odongo, Steven; Okella, Hedmon; Ndekezi, Christian; Okee, Moses; Namayanja, Monica; Mujuni, Brian; Sterckx, Yann G. J.; Kizito, Dennison; Mwiine, Frank Nobert; Lutwama, Julius Julian; Ibingira, Charles
    The SARS-CoV-2 virus, the agent of COVID-19, caused unprecedented loss of lives and economic decline worldwide. Although the introduction of public health measures, vaccines, diagnostics, and therapeutics disrupted the spread of the SARS-CoV-2, the emergence of variants poses substantial threat. This study traced SARS-CoV-2 variants circulating in Uganda by July 2021 to inform the necessity for refinement of the intervention medical products. A comprehensive in silico analysis of the SARS-CoV-2 genomes detected in clinical samples collected from COVID-19 patients in Uganda revealed occurrence of structural protein variants with potential of escaping detection, resisting antibody therapy, or increased infectivity. The genome sequence dataset was retrieved from the GISAID database and the open reading frame encoding the spike, envelope, membrane, or nucleocapsid proteins was translated. The obtained protein sequences were aligned and inspected for existence of variants. The variant positions on each of the four alignment sets were mapped on predicted epitopes as well as the 3D structures. Additionally, sequences within each of the sets were clustered by family. A phylogenetic tree was constructed to assess relationship between the encountered spike protein sequences and Wuhan-Hu-1 wild-type, or the Alpha, Beta, Delta and Gamma variants of concern. Strikingly, the frequency of each of the spike protein point mutations F157L/Del, D614G and P681H/R was over 50%. The furin and the transmembrane serine protease 2 cleavage sites were unaffected by mutation. Whereas the Delta dominated the spike sequences (16.5%, 91/550), Gamma was not detected. The envelope protein was the most conserved with 96.3% (525/545) sequences being wild-type followed by membrane at 68.4% (397/580). Although the nucleocapsid protein sequences varied, the variant residue positions were less concentrated at the RNA binding domains. The dominant nucleocapsid sequence variant was S202N (34.5%, 205/595). These findings offer baseline information required for refining the existing COVID-19 vaccines, diagnostics, and therapeutics.
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    Risk factors for Crimean-Congo Haemorrhagic Fever (CCHF) virus exposure in farming communities in Uganda
    (Journal of Infection, 2022) Atim, Stella A.; Ashraf, Shirin; Ademun, Anna R.; Nakayiki, Teddy; Balinandi, Stephen; Nakanjako, Gladys; Abaasa, Andrew; Odongo, Steven; Esau, Martin; Kaleebu, Pontiano; Lutwama, Julius J.; Masembe, Charles; Lambe, Teresa; Tweyongyere, Robert
    Crimean-Congo Haemorrhagic Fever (CCHF) is an emerging human-health threat causing sporadic outbreaks in livestock farming communities. However, the full extent and the risks associated with exposure of such communities has not previously been well-described. We collected blood samples from 800 humans, 666 cattle, 549 goats and 32 dogs in districts within and outside Ugandan cattle corridor in a cross-sectional survey, and tested for CCHFV-specific IgG antibodies using Enzyme-Linked Immunosorbent Assays. Sociodemographic and epidemiological data were recorded using structured questionnaire. Ticks were collected to identify circulating nairoviruses by metagenomic sequencing. CCHFV seropositivity was in 221/800 (27·6%) in humans, 612/666 (91·8%) in cattle, 413/549 (75·2%) in goats and 18/32 (56·2%) in dogs. Human seropositivity was associated with livestock farming (AOR=5·68, p<0·0001), age (AOR=2·99, p=0·002) and collecting/eating engorged ticks (AOR=2·13, p=0·004). In animals, seropositivity was higher in cattle versus goats (AOR=2·58, p<0·0001), female sex (AOR=2·13, p=0·002) and heavy tick infestation (>50 ticks: AOR=3·52, p=0·004). CCHFV was identified in multiple tick pools of Rhipicephalus appendiculatus.