Browsing by Author "Ochwo-Ssemakula, Mildred"
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Item Challenges and innovations in achieving zero hunger and environmental sustainability through the lens of sub-Saharan Africa(Outlook on Agriculture, 2020) Okello, Moses; Lamo, Jimmy; Ochwo-Ssemakula, Mildred; Onyilo, FrancisAchieving zero hunger by 2030 often raises the issue of environmental protection or sustainable social development among policy makers due to the environmental footprint of intensifying agricultural production across the continent. Sub- Saharan Africa (SSA) has one of the fastgrowing populations with more than half of the global growth between now and 2050. The challenge now lies in feeding the ever-growing population that is exerting pressure on the limited available resources. Doubling the agricultural productivity of small-scale farmers by 2030 (SDG 2.3) remains a daunting task for researcher and policy makers to address on the continent that now relies much on imports of food. Exploitation of the untapped massive land resources for agricultural production poses threats to sustainability. However, the challenges of global warming cannot be left out of this discussion since it has direct impact on future productivity on the continent. Climate change that has been projected to mostly affect the poorer countries also present trials to the food system through increased diseases and weather extremes of floods and droughts. Questions are yet to be answered on which tradeoffs and synergies if any need to be made to achieve zero hunger in Africa by 2030. This synopsis critically breaks down the conflicts, tradeoffs and synergies of how a continent with such massive agricultural production potential can navigate sustainably to achieve zero hunger, self-sufficiency and exports prospects while conserving the environment and natural resources. Evident deployment of new and improved technologies especially advanced biotechnology tools will be critical in achieving zero hunger by 2030. The adaptation needs of the continent are broad including institutional, social, physical and infrastructural needs, ecosystem services and environmental needs, and financial and capacity uncertain impacts.Item Combining ability and heritability analysis of sweetpotato weevil resistance, root yield, and dry matter content in sweetpotato(Frontiers Media S.A., 2022-09) Mugisa, Immaculate; Karungi, Jeninah; Musana, Paul; Odama, Roy; Alajo, Agnes; Chelangat, Doreen M; Anyanga, Milton O; Oloka, Bonny M.; Gonçalves dos Santos, Iara; Talwana, Herbert; Ochwo-Ssemakula, Mildred; Edema, Richard; Gibson, Paul; Ssali, Reuben; Campos, Hugo; Olukolu, Bode A; Guilherme; Yencho, Craig; Yada, Benard; da Silva Pereira, Guilherme; Yencho, CraigEfficient breeding and selection of superior genotypes requires a comprehensive understanding of the genetics of traits. This study was aimed at establishing the general combining ability (GCA), specific combining ability (SCA), and heritability of sweetpotato weevil (Cylas spp.) resistance, storage root yield, and dry matter content in a sweetpotato multi-parental breeding population. A population of 1,896 F1 clones obtained from an 8 × 8 North Carolina II design cross was evaluated with its parents in the field at two sweetpotato weevil hotspots in Uganda, using an augmented row-column design. Clone roots were further evaluated in three rounds of a no-choice feeding laboratory bioassay. Significant GCA effects for parents and SCA effects for families were observed for most traits and all variance components were highly significant (p ≤ 0.001). Narrow-sense heritability estimates for weevil severity, storage root yield, and dry matter content were 0.35, 0.36, and 0.45, respectively. Parental genotypes with superior GCA for weevil resistance included “Mugande,” NASPOT 5, “Dimbuka-bukulula,” and “Wagabolige.” On the other hand, families that displayed the highest levels of resistance to weevils included “Wagabolige” × NASPOT 10 O, NASPOT 5 × “Dimbuka-bukulula,” “Mugande” × “Dimbuka-bukulula,” and NASPOT 11 × NASPOT 7. The moderate levels of narrow-sense heritability observed for the traits, coupled with the significant GCA and SCA effects, suggest that there is potential for their improvement through conventional breeding via hybridization and progeny selection and advancement. Although selection for weevil resistance may, to some extent, be challenging for breeders, efforts could be boosted through applying genomics-assisted breeding. Superior parents and families identified through this study could be deployed in further research involving the genetic improvement of these traits.Item Continuous Storage Root Formation and Bulking in Sweet potato(Gates Open Research, 2019) Bararyenya, Astere; Tukamuhabwa, Phinehas; Gibson, Paul; Grüneberg, Wolfgang; Ssali, Reuben; Low, Jan; Odong, Thomas; Ochwo-Ssemakula, Mildred; Talwana, Herbert; Mwila, Natasha; Mwanga, RobertSweetpotato (Ipomoea batatas (L.) Lam, family Convolvulaceae.) is one of the most important food crops worldwide, with approximately 106 million tons produced in almost 120 countries from an area of about 8 million ha and an average global yield of 11.1 tons/ha (FAO, 2016). Asia is the world’s largest sweetpotato producing continent, with 79 million tons, followed by Africa (FAOstat, 2016). About 75% of this global production is from China alone. A total of 21.3 million tons is produced in Africa, with 48% from the Great Lakes region. In East Africa, the crop is the second most important root crop after cassava and has played an important role as a famine-relief crop during its long history and has recently been reevaluated as a health-promoting food (Low et al., 2017). Uganda ranks as the fourth largest sweetpotato producer in the world after China, Nigeria and Tanzania, with a production of 2.1 million t. In Africa, Uganda is ranked third after Nigeria and Tanzania. Sweetpotato is one of the main staple crops in the food systems of Uganda, Rwanda, and Burundi with a per capita consumption of 50.9, 80.1 and 57.0 kg, respectivelyItem Evaluation of rice genotypes for resistance to the stalk-eyed fly (Diopsis longicornis) in rice in Uganda(International Journal of Agronomy and Agricultural Research (IJAAR), 2016) Ganteh Weelar, Charles; Otim, Michael Hilary; Lamo, Jimmy; Awio, Bruno; Ochwo-Ssemakula, MildredGlobally, rice production is limited by abiotic and biotic factors. Of the insect pests attacking rice, the stalk-eyed fly is the most abundant. Major rice growing districts in Uganda are affected, and varieties grown by farmers are susceptible. The objective of this study was to identify sources of resistance to stalk-eyed flies among improved rice genotypes in Uganda. Fifty genotypes from the Africa Rice Centre, IRRI, South Korea and the National Crops Resources Research Institute (NaCRRI) in Uganda were screened under cage and field conditions at NaCRRI. Trials were laid out in an alpha lattice design, with 3 replications, for both experiments. Natural infestation (D. longicornis or D. apicalis) was used in the field while cage trials utilized artificial infestation with D. longicornis. Data on deadhearts were collected from seedling to tillering stages, at 7, 14, 21 and 28 days. Analyses of variance were performed using restricted maximum likelihood. Infestation levels for 31 (62%) rice genotypes were the same under both field and cage conditions, 4 (8%) genotypes showed higher susceptibility in the cage than in the field and 15 (30%) were more resistant in the cage than in the field. Genotypes NERICA 4, TXD306, NM7-22-11- B-P-1-1 and K85 were identified as the most resistant varieties. F3 genotypes (GSR IR1- 5-S14-S2-Y1 x K85, Gigante x NERICA4, NERICA4 x Gigante, NERICA1x NERICA4, NERICA4 x NERICA6, and NERICA4 x SUPA) were also found resistant. These genotypes were recommended for release and further advancement, respectively.Item Factors Influencing Genomic Prediction Accuracies of Tropical Maize Resistance to Fall Armyworm and Weevils(Plants, 2021) Badji, Arfang; Machida, Lewis; Kwemoi, Daniel Bomet; Kumi, Frank; Okii, Dennis; Mwila, Natasha; Agbahoungba, Symphorien; Ibanda, Angele; Bararyenya, Astere; Ndapewa Nghituwamhata, Selma; Odong, Thomas; Wasswa, Peter; Otim, Michael; Ochwo-Ssemakula, Mildred; Talwana, Herbert; Asea, Godfrey; Kyamanywa, Samuel; Rubaihayo, PatrickGenomic selection (GS) can accelerate variety improvement when training set (TS) size and its relationship with the breeding set (BS) are optimized for prediction accuracies (PAs) of genomic prediction (GP) models. Sixteen GP algorithms were run on phenotypic best linear unbiased predictors (BLUPs) and estimators (BLUEs) of resistance to both fall armyworm (FAW) and maize weevil (MW) in a tropical maize panel. For MW resistance, 37% of the panel was the TS, and the BS was the remainder, whilst for FAW, random-based training sets (RBTS) and pedigree-based training sets (PBTSs) were designed. PAs achieved with BLUPs varied from 0.66 to 0.82 for MW-resistance traits, and for FAW resistance, 0.694 to 0.714 for RBTS of 37%, and 0.843 to 0.844 for RBTS of 85%, and these were at least two-fold those from BLUEs. For PBTS, FAWresistance PAs were generally higher than those for RBTS, except for one dataset. GP models generally showed similar PAs across individual traits whilst the TS designation was determinant, since a positive correlation (R = 0.92***) between TS size and PAs was observed for RBTS, and for the PBTS, it was negative (R = 0.44**). This study pioneered the use of GS for maize resistance to insect pests in sub-Saharan Africa.Item Genome-wide association study identified candidate genes controlling continuous storage root formation and bulking in hexaploid sweetpotato(BMC plant biology, 2020) Bararyenya, Astère; Olukolu, Bode A.; Tukamuhabwa, Phinehas; Grüneberg, Wolfgang J.; Ekaya, Wellington; Low, Jan; Ochwo-Ssemakula, Mildred; Odong, Thomas L.; Talwana, Herbert; Badji, Arfang; Kyalo, Martina; Nasser, Yao; Gemenet, Dorcus; Kitavi, Mercy; Mwanga, Robert O. M.Continuous storage root formation and bulking (CSRFAB) in sweetpotato is an important trait from agronomic and biological perspectives. Information about the molecular mechanisms underlying CSRFAB traits is lacking. Results: Here, as a first step toward understanding the genetic basis of CSRFAB in sweetpotato, we performed a genome-wide association study (GWAS) using phenotypic data from four distinct developmental stages and 33,068 single nucleotide polymorphism (SNP) and insertion-deletion (indel) markers. Based on Bonferroni threshold (pvalue < 5 × 10− 7), we identified 34 unique SNPs that were significantly associated with the complex trait of CSRFAB at 150 days after planting (DAP) and seven unique SNPs associated with discontinuous storage root formation and bulking (DCSRFAB) at 90 DAP. Importantly, most of the loci associated with these identified SNPs were located within genomic regions (using Ipomoea trifida reference genome) previously reported for quantitative trait loci (QTL) controlling similar traits. Based on these trait-associated SNPs, 12 and seven candidate genes were respectively annotated for CSRFAB and DCSRFAB traits. Congruent with the contrasting and inverse relationship between discontinuous and continuous storage root formation and bulking, a DCSRFAB-associated candidate gene regulates redox signaling, involved in auxin-mediated lateral root formation, while CSRFAB is enriched for genes controlling growth and senescence. Conclusion: Candidate genes identified in this study have potential roles in cell wall remodeling, plant growth, senescence, stress, root development and redox signaling. These findings provide valuable insights into understanding the functional networks to develop strategies for sweetpotato yield improvement. The markers as well as candidate genes identified in this pioneering research for CSRFAB provide important genomic resources for sweetpotato and other root crops.Item Genotype by environment interaction effects on grain yield of highland maize (Zea mays L) hybrids(Maydica, 2018) Ninsiima Kayaga, Hellen; Ochwo-Ssemakula, Mildred; Kagoda, Frank; Mahulé Elysé Alladassi, Boris; Asea, Godfrey; Gibson, Paul; Edema, RichardMaize varieties adapted to highland environments are generally scarce in East and Central Africa (ECA) since most breeding efforts have focused on mid-altitude maize. As a result, farmers in the highlands of Uganda mainly grow varieties that are bred for the mid-altitude zones. Since these maize varieties are not adapted to highland conditions, their productivity in this region rarely exceeds 2 t ha-1. This study was aimed at determining the effect of genotype by environment interactions (GEI) on the grain yield of highland maize hybrids. The study was conducted in three highland locations of Uganda in the maize growing season of March to October 2015. Thirty-six F1 hybrids and two checks were arranged in a 2 x18 (0, 1) alpha lattice design with two replications. Hybrid by location interaction had highly significant differences (P ≤ 0.001) and explained 46.2% of phenotypic variance. Genotype by environment interactions (GEI), thus, had a strong effect on grain yield. Analyses revealed two maize megaenvironments, with AMH701-9/AMH703-22 hybrid emerging the best genotype in Kachwekano and Kalengyere (6.69 t ha-1 and 14.30 t ha-1), and AMH701-9/AMH701-20 hybrid being the best in Buginyanya (14.39 t ha-1). Efforts to breed for high yielding maize cultivars for the highland areas of Uganda should therefore focus more on specific adaptation than broad adaptation.Item Inheritance of resistance to brown spot disease in upland rice in Uganda(Journal of Plant Breeding and Crop Science, 2017) Mwendo, Marco Martin; Ochwo-Ssemakula, Mildred; Mwale, Saul Eric; Lamo, Jimmy; Gibson, Paul; Edema, RichardBrown spot disease caused by Bipolaris oryzae [Breda de Haan (Shoem.)] is one of the most important diseases affecting rice (Oryza sativa L.) worldwide. Host plant resistance is considered an effective, cheap and environment friendly means of managing this disease. Nine rice genotypes with varying resistance levels were crossed in a full diallel mating design including reciprocals and parents. Parents, reciprocals and F2 progenies were evaluated in an alpha lattice design in the screen house and field trials at the National Crops Resources Research Institute in Uganda in 2013-2014. The objectives of the study were to determine the mode of inheritance for resistance to brown spot disease and characterize segregation patterns of specific F2 progenies. Significant (P ≤0.001) variation for brown spot resistance occurred among the tested genotypes. The general combining ability (GCA) and specific combining ability (SCA) effects of brown spot disease scores were both significantly different (P≤0.001), indicating that both additive and non-additive genetic effects were present. There was, however, a predominance of non-additive genetic effects in the genetic control of brown spot resistance as shown by low estimates of baker’s ratio (0.29) and narrow sense coefficient of genetic determination (0.24), implying that progeny performance could not be predicted from parents GCA effects as it was better only in specific crossing combinations. Segregation patterns also indicated that resistance to brown spot was controlled by one or two dominant genes. The reciprocal effects for the crosses were significantly different (P ≤ 0.05), suggesting that cytoplasmic genetic effects modified the expression of resistance. Care should, therefore, be taken when selecting female parents during hybridization. Family-based breeding programs would also be effective for improving resistance to brown spot in rice varieties adapted to Uganda.Item Inheritance of Yield and Yield-related Traits in Highland Maize Hybrids of Uganda(Journal of crop science and biotechnology, 2017) Ninsiima Kayaga, Hellen; Kagoda, Frank; Ochwo-Ssemakula, Mildred; Mahulé Elysé Alladassi, Boris; Asea, Godfrey; Gibson, Paul; Edema, RichardAlthough many studies have been conducted on gene action of grain yield and yield related traits in maize, none of them focused on highland maize in Uganda. This study was conducted to establish the gene action controlling inheritance of yield and its related traits in highland maize hybrids. Thirty-six F1 hybrids generated from a 9 x 9 half diallel mating design, were planted with two local checks in three highland locations; Kalengyere, Kachwekano, and Buginyanya with two replications using a 2 x 19 alpha (0, 1) lattice design. Results showed that inheritance of ear length and anthesis-silking interval was controlled by both additive and non-additive gene action while the inheritance of days to anthesis, days to silking was mainly controlled by additive gene action. The inheritance of grain yield and other yield related traits was greatly influenced by environment and genotype x environment interaction. Considering the great influence of the environment and genotype x environment interaction on most of the traits including grain yield, further testing in additional locations over more seasons and broadening the genetic base of the parents is encouraged.Item Mode of inheritance of resistance to the stalk-eyed fly (Diopsis longicornis) in rice(International Journal of Agronomy and Agricultural Research, 2017) Ganteh Weelar, Charles; Lamo, Jimmy; Otim, Michael Hilary; Awio, Bruno; Ochwo-Ssemakula, MildredStalk eyed flies (D. longicornis and D. apicalis) are pests of economic importance on rice. Of the two species of stalk- eyed fly, D. longicornis is the most prevalent and destructive. To determine the mode of inheritance for resistance to the stalk-eyed fly in rice in Uganda, crosses were made among eight parental lines (NERICA4, TXD306, K85, NM7-22-11-B-P-1-1, NERICA1, NERICA6, NAMCHE2 and PAKISTAN) selected on the basis of their response to the stalk-eyed fly, high yield and early maturity. Of the eight, four genotypes [NERICA4, TXD306, and NM7-22-11-B-P-1-1 and K85], exhibited lower levels of deadheart occurrence and were crossed using the North Carolina II mating design with four susceptible genotypes [NERICA1 and NERICA6, PAKISTAN, and NAMCHE2]. Studies on combining abilities were conducted on 16 F1 hybrids along with the eight parents. Narrow sense coefficients of genetic determination (NSCGD) were low to moderate (0.09 - 0.33) and broad sense coefficients of genetic determination (BSCGD) were moderate to high (0.38 - 0.89) for traits studied. Both GCA and SCA effects were significant for percentage of deadhearts. However, Baker’s ratio was less than 0.5 (0.37) for deadhearts, indicating that both additive and non-additive gene effects were involved in resistance to the stalkeyed fly, although non-additive gene effects were more important. NERICA4 andK85 were found to be good general combiners for increasing resistance. The crosses Pakistan × TXD306 and NERICA1× NM7-22-11-B-P-1-1 were identified as promising lines for advancement.Item New sources of sorghum resistant genotypes to downy mildew disease in Uganda(BIODIVERSITAS, 2019) Kumi, Frank; Badji, Arfang; Mwila, Natasha; Odong, Thomas; Ochwo-Ssemakula, Mildred; Tusiime, Geoffrey; Gibson, Paul; Biruma, Moses; Prom, Louis K.; Cuevas, Hugo E.; Agbahoungba, Symphorien; Rubaihayo, PatrickKumi F, Badji A, Mwila N, Odong T, Ochwo-Ssemakula M, Tusiime G, Gibson P, Biruma M, Prom KL, Cuevas HE, Agbahoungba S, Rubaihayo P. 2019. New sources of sorghum resistant genotypes to downy mildew disease in Uganda. Biodiversitas 20: 3391-3397. Sorghum downy mildew (SDM) disease is still prevalent in Uganda at varying levels of incidence and severity. In this study, a total of 100 sorghum genotypes, five (5) from (U.SA, India, and Sudan) and 95 genotypes from Uganda were evaluated for resistance to downy mildew and other agronomic traits during the second growing season of 2016 (August-December). The experiment was conducted in two locations at Makerere University Agricultural Research Institute at Kabanyolo (MUARIK) and Abi-Zonal Agricultural Research and Development Institute (Abi-ZARDI) research station at Arua. The experimental design used was 10 x 10 alpha lattice design with three replicates. Data were collected on plant disease incidence (PDI), plant disease severity (PDS), area under disease progress curve (AUDPC), days to 50% flowering, plant height, 1000 seed weight, and grain yield. Results for analysis of variance showed highly significant differences (P < 0.001) in genotypes, location, and AUDPC, yield and yield components. Disease incidence varied significantly (P < 0.001) between locations, and Arua recorded highest disease incidence and severity of 80.6 and 2.8, respectively. Results from correlation analysis showed a highly significant (P < 0.001) positive association of downy mildew disease incidence with AUDPC (0.835) which suggests that the severity of SDM disease increased with disease incidence, whiles significant (P < 0.001) negative correlation was recorded for days to 50 % flowering (-0.302), 1000 seed weight (-0.471), and grain yield (-0.585), suggesting that grain yield and yield component decreased significantly with increase in SDM incidence and severity. Two resistant (PI 656061 and PI 533831) and four moderately resistant (E 40, MAKSO 8, PI 655990 and Epuripur) genotypes were identified from this study. These genotypes were recommended for sorghum breeding program against downy mildew disease.Item Response of Cowpea Genotypes to Drought Stress in Uganda(American Journal of Plant Sciences, 2017) Mwale, Saul Eric; Ochwo-Ssemakula, Mildred; Sadik, Kassim; Achola, Esther; Okul, Valentor; Gibson, Paul; Edema, Richard; Singini, Wales; Rubaihayo, PatrickMoisture stress is a challenge to cowpea production in the drought prone areas of eastern and north eastern Uganda, with yield losses of up to 50% reported. Genotypes grown by farmers are not drought tolerant. This study was therefore, undertaken at Makerere University Agricultural Research Institute Kabanyolo to identify cowpea genotypes tolerant to drought. Thirty cowpea accessions comprising of Ugandan landraces and released varieties, Brazilian lines, Makerere University breeding lines, elite IITA germplasm and seven IITA drought tolerant lines as checks were screened for drought tolerance at vegetative and reproductive stages. The experiment was designed as a 2 × 37 factorial and laid out in a split-plot arrangement, 37 genotypes of cowpea at two soil moisture stress levels (T1, no stress and T2, severe stress) with all factorial combinations replicated two times in a screen house. The genotypes showed considerable variability in tolerance to drought. Genotypes were significantly different for chlorophyll content (P ≤ 0.01), efficiency of photosystem II (P ≤ 0.05), non-photochemical quenching (P ≤ 0.05), recovery (P ≤ 0.01), delayed leaf senescence (P ≤ 0.01), grain yield (P ≤ 0.01), 100 seed weight (P ≤ 0.05), number of pods per plant and number of seeds per pod (P ≤ 0.001). There was a highly significant positive correlation between chlorophyll content and efficiency of photosystem II (r = 0.75, P ≤ 0.001) implying that chlorophyll content and efficiency of photosystem II could be used as efficient reference indicators in the selection of drought tolerant genotypes. Genotypes SECOW 5T, SECOW 3B, SECOW 4W, WC 30 and MU 24 C gave relatively high yields under stress and no stress conditions, maintained above mean chlorophyll content, efficiency of photosystem II and had good recovery scores from stress and thus were tolerant to drought stress induced at both vegetative and reproductive stages.